CUTANATM pAG-Tn5 is highly purified and depleted of contaminating nucleic acids, so residual E. coli DNA cannot be used for sequencing normalization. We do not recommend adding exogenous E. coli Spike-in DNA, as we have not thoroughly optimized its use in CUT&Tag.
Can I use E. coli DNA for CUT&Tag sequencing normalization?
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